
   20-Dec-2020 14:13:54 +0100

rootdir = ..\191108_Bob_HumanBlood1\
sampleName = H01_RT
measNums = 1 2 3 4 5 6 
frameNums = 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 445 cell sequences
cell traces covers the whole channel: 357 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 5
write results (352 cells):
----------
----------
352 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1566 cell sequences
cell traces covers the whole channel: 695 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 5
write results (690 cells):
----------
----------
690 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1478 cell sequences
cell traces covers the whole channel: 598 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 9
write results (589 cells):
----------
----------
589 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1446 cell sequences
cell traces covers the whole channel: 666 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 10
write results (656 cells):
----------
----------
656 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1412 cell sequences
cell traces covers the whole channel: 551 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 6
write results (545 cells):
----------
----------
545 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1363 cell sequences
cell traces covers the whole channel: 679 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 9
write results (670 cells):
----------
----------
670 cells written
measurement: ..\191108_Bob_HumanBlood1\H01_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	445	357	352	352
2	1566	695	690	690
3	1478	598	589	589
4	1446	666	656	656
5	1412	551	545	545
6	1363	679	670	670

   9-Mar-2022 22:37:33 +0100

rootdir = ..\191108_Bob_HumanBlood1\
sampleName = 191108_H01_8nlps_RT
measNums = 1 2 3 4 5 6 
frameNums = 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 445 cell sequences
cell traces covers the whole channel: 357 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 5
write results (352 cells):
----------
----------
352 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1566 cell sequences
cell traces covers the whole channel: 695 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 5
write results (690 cells):
----------
----------
690 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1478 cell sequences
cell traces covers the whole channel: 598 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 9
write results (589 cells):
----------
----------
589 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1446 cell sequences
cell traces covers the whole channel: 666 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 10
write results (656 cells):
----------
----------
656 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1412 cell sequences
cell traces covers the whole channel: 551 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 6
write results (545 cells):
----------
----------
545 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1363 cell sequences
cell traces covers the whole channel: 679 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 9
write results (670 cells):
----------
----------
670 cells written
measurement: ..\191108_Bob_HumanBlood1\191108_H01_8nlps_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	445	357	352	352
2	1566	695	690	690
3	1478	598	589	589
4	1446	666	656	656
5	1412	551	545	545
6	1363	679	670	670
